MirGeneDB 2.1

MirGeneDB ID

Cmi-Novel-2

Family name CHO-NOVEL-2 (all species)
Seed UUUUUGC
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues
Orthologues Sto-Novel-2 
Node of Origin (locus) Chondrichthyes
Node of Origin (family) Chondrichthyes
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)
KI635864.1: 11626459-11626518 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GACGGCCACCCGCGUGAGCGAUGUGAUGAUGUUUUUGCGACGCGAUGACGUUUUUCGACACAAAUUACAUCAUCACGACGCGAAUUACGUCAUCGCGUUGCACGGUUACACAUCAGUGGG
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Structure
        10          20        30         40        50         
GACGGCCACCCGCGUGA--               U-|     A  C     C  UUUUCGA 
                   GCGAUGUGAUGAUGU  UUUGCG CG GAUGA GU       \
                   CGUUGCGCUACUGCA  AAGCGC GC CUACU CA       C
GGGUGACUACACAUUGGCA               UU^     A  A     A  UUAAACA 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Bl Br Ey Gi Gl He In Ki Li Mu Ov Pa Sk Sp Te Ut
Mature sequence

Cmi-Novel-2_5p

mirBase accessionNone
Sequence
0- GUUUUUGCGACGCGAUGACGU -21
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Star sequence

Cmi-Novel-2_3p*

mirBase accessionNone
Sequence
38- AUCAUCACGACGCGAAUUACGU -60
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