MirGeneDB 2.1

MirGeneDB ID

Cmi-Novel-22

Family name CMI-NOVEL-22 (all species)
Seed UGUGGUG
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) C. milii
Node of Origin (family) C. milii
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)
KI635858.1: 12019529-12019591 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUAGUUCGUCAUUGCGGCUGAUAAGUGGGCAUGUGGUGACGGUCAAGACUGCAUUUCUCGCUAUUCAUUGCAUCUUGACCCAUCACUGCAAGCGUACUUACCGGCAAGCAUUAGAAUCGCAUU
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Structure
        10          20        30        40         50        60 
GUAGUUCGUCAUUGCGG--   A      G  A  UG    C-|       C    UUUCUCG 
                   CUG UAAGUG GC UG  GUGA  GGUCAAGA UGCA       \
                   GGC AUUCAU CG AC  CACU  CCAGUUCU ACGU       C
UUACGCUAAGAUUACGAAC   C      G  A  GU    AC^       -    UACUUAU 
 120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Bl Br Ey Gi Gl He In Ki Li Mu Ov Pa Sk Sp Te Ut
Mature sequence

Cmi-Novel-22_5p

mirBase accessionNone
Sequence
0- AUGUGGUGACGGUCAAGACUGCA -23
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Co-mature sequence

Cmi-Novel-22_3p

mirBase accessionNone
Sequence
40- CAUCUUGACCCAUCACUGCAAGC -63
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