MirGeneDB 2.1

MirGeneDB ID

Cmi-Novel-23

Family name CMI-NOVEL-23 (all species)
Seed GUUGUCU
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) C. milii
Node of Origin (family) C. milii
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)
KI635855.1: 3905447-3905504 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAUUCCAAUGCUUGUCGGAAAGUGCACGUGUGGUCACAGGUCAAAGCGCAUUGAGUGAAAAGAAAUGUUGUCUUGACCUGUCACUGCAUGUGCACUUACCAGCUGCAAUGAAUUAUGU
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Structure
        10          20        30        40         50        
CAUUCCAAUGCUUGUCGGA--           UG  C         AG -|    GAGUG 
                     AAGUGCACGUG  GU ACAGGUCAA  C GCAUU     \
                     UUCACGUGUAC  CA UGUCCAGUU  G UGUAA     A
UGUAUUAAGUAACGUCGACCA           GU  C         CU U^    AGAAA 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Bl Br Ey Gi Gl He In Ki Li Mu Ov Pa Sk Sp Te Ut
Star sequence

Cmi-Novel-23_5p*

mirBase accessionNone
Sequence
0- UGGUCACAGGUCAAAGCGCAUU -22
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Mature sequence

Cmi-Novel-23_3p

mirBase accessionNone
Sequence
35- UGUUGUCUUGACCUGUCACUGCA -58
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