| MirGeneDB ID | Cpi-Mir-9584 |
|---|
| Family name |
MIR-9584 (all species) |
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| Seed |
UGUGACU |
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| Species |
Western painted turtle (Chrysemys picta bellii) |
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| MiRBase ID |
cpi-mir-9584
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. picta
|
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| Node of Origin (family) |
C. picta
|
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Genome context
(chrPic1) |
JH584684: 2537512-2537569 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
GGUGUUGUGAGCCUGGAACCAUCUAGAGAGCUGUGACUGUUUAGAUGGUCGUGUGGGGUAUGCGCACACAGCCUCAGCAGUCACUGCUUUUUAGAUGUUUCUCUGUUAUGGCAUCAUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GGUGUUGUGAGCCUGGAAC--| U UA U C UGGGGU
CAUCUAGAGAGC GUGACUGUU GA GGU GUG \
GUAGAUUUUUCG CACUGACGA CU CCG CAC A
UUACUACGGUAUUGUCUCUUU^ U -- - A ACGCGU
110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Cpi-Mir-9584_5p |
| mirBase accession | MIMAT0037964 |
|---|
| Sequence |
0- CUGUGACUGUUUAGAUGGUCGUG -23
Get sequence
|
|---|
| Co-mature sequence |
Cpi-Mir-9584_3p |
| mirBase accession | MIMAT0037965 |
|---|
| Sequence |
38- CAGCCUCAGCAGUCACUGCU -58
Get sequence
|
|---|
