| MirGeneDB ID | Cpi-Mir-9595 |
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| Family name |
MIR-9595 (all species) |
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| Seed |
CUGCUAC |
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| Species |
Western painted turtle (Chrysemys picta bellii) |
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| MiRBase ID |
cpi-mir-9595
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
C. picta
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| Node of Origin (family) |
C. picta
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Genome context
(chrPic1) |
JH584479: 1470293-1470352 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCAGCAGCCAGUGGACUGCUCUCCUGGCACUCUGCUACACAGCCAGAGCGUCCGUGAGCCACAAGUGGAUGUCCCGGCUGUGAGUAGCGUGCAGGGAAUGGAGGAAGAACAACAAAAGGA
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GCAGCAGCCAGUGGACUGCUC--| G U A AGA CGUGAGC
UCCU GCAC CUGCU CACAGCC GCGUC \
AGGG CGUG GAUGA GUGUCGG UGUAG C
AGGAAAACAACAAGAAGGAGGUA^ A C - CCC GUGAACA
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | UG at 5p(-14) |
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Tissue expression
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|
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| Mature sequence |
Cpi-Mir-9595_5p |
| mirBase accession | MIMAT0037986 |
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| Sequence |
0- UCUGCUACACAGCCAGAGCGUC -22
Get sequence
|
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| Co-mature sequence |
Cpi-Mir-9595_3p |
| mirBase accession | MIMAT0037987 |
|---|
| Sequence |
39- UGUCCCGGCUGUGAGUAGCGU -60
Get sequence
|
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