MirGeneDB ID | Dan-Novel-11 |
Family name |
DAN-NOVEL-11 (all species) |
Seed |
AAGCAGU |
Species |
Fruit fly (Drosophila ananassae) |
MiRBase ID |
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Paralogues |
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Orthologues |
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Node of Origin (locus) |
D. ananassae
|
Node of Origin (family) |
D. ananassae
|
Genome context (Dana_caf1) |
scaffold_12929: 3159781-3159857 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUUCGGUUUUUUUUUUUCUUUUGGAAUUCAGAUAUUUUUCCAUUCGUUUUGGUGGGUGACAGCUGUUUGUUGGUUUGAAGAACGCCAAAGCAGUGGGAAAAUCUCUGAAUAUUGAAAGCGACAAGCGGCAAGCUCCC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UUUCGGUUUUUUUUUUU--| UG A U C UGGGUGACAGCUGUU
CUUU G AUUCAGA AUUUUUCCAUU GUUUUGG U
GAAA U UAAGUCU UAAAAGGGUGA CGAAACC G
CCCUCGAACGGCGAACAGC^ GU A C - GCAAGAAGUUUGGUU
130 120 110 100 90 80 70 |
Deep sequencing |
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|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Dan-Novel-11_5p* |
mirBase accession | None |
Sequence |
0- GAUAUUUUUCCAUUCGUUUUGG -22
Get sequence
|
Mature sequence |
Dan-Novel-11_3p |
mirBase accession | None |
Sequence |
56- AAAGCAGUGGGAAAAUCUCUG -77
Get sequence
|