MirGeneDB 3.0

MirGeneDB ID

Dan-Novel-5

Family name DAN-NOVEL-5 (all species)
Seed GUAGAAG
Species Fruit fly (Drosophila ananassae)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) D. ananassae
Node of Origin (family) D. ananassae
Genome context
(Dana_caf1)
scaffold_12903: 550549-550607 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UAAUAAUUCUUGGAGUAUUAUCUAAUUAUCAGUAGAAGCCAAAAGGAUGUGAGUAUUUUUGAAAUCCACCUCCCUUUGGCUUCUACUACUUAAUUGGUAAUCAAAACUGCUUCAAAAAC
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Structure
        10          20        30         40        50         
UAAUAAUUCUUGGAGUA--|  U       UC-             A   U   AGUAUUU 
                   UUA CUAAUUA   AGUAGAAGCCAAA GGA GUG       \
                   AAU GGUUAAU   UCAUCUUCGGUUU CCU CAC       U
CAAAAACUUCGUCAAAACU^  -       UCA             C   C   CUAAAGU 
       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Fe
Mature sequence

Dan-Novel-5_5p

mirBase accessionNone
Sequence
0- AGUAGAAGCCAAAAGGAUGUG -21
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Star sequence

Dan-Novel-5_3p*

mirBase accessionNone
Sequence
38- CCUCCCUUUGGCUUCUACUAC -59
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