MirGeneDB ID | Dan-Novel-6 |
Family name |
DAN-NOVEL-6 (all species) |
Seed |
AGAGGUA |
Species |
Fruit fly (Drosophila ananassae) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
|
Node of Origin (locus) |
D. ananassae
|
Node of Origin (family) |
D. ananassae
|
Genome context (Dana_caf1) |
scaffold_12903: 550718-550780 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CUUAUGAAUAUCUUAUAUAAUAUCACUUUUGAGAGGUACGGAAUGCUUGUAUGUGACCUUGAACUUCAUGGAAGCAUUUGGCGUACAUCUAAAAAGUUAUAUUUAUUUCCCAAUAUCCCUCAG
Get precursor sequence
|
Structure | 10 20 30 40 50
CUUAUGAAUAUCUUAUAU-- C G G --| G UGACCU
AAUAU ACUUUU AGA GUACG GAAUGCUU UAUG \
UUAUA UGAAAA UCU CAUGC UUUACGAA GUAC U
GACUCCCUAUAACCCUUUAU U A A GG^ G UUCAAG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Dan-Novel-6_5p |
mirBase accession | None |
Sequence |
0- GAGAGGUACGGAAUGCUUGUAUG -23
Get sequence
|
Star sequence |
Dan-Novel-6_3p* |
mirBase accession | None |
Sequence |
38- UGGAAGCAUUUGGCGUACAUCUAAA -63
Get sequence
|