| MirGeneDB ID | Dan-Novel-9 |
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| Family name |
DAN-NOVEL-9 (all species) |
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| Seed |
AUGAGAA |
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| Species |
Fruit fly (Drosophila ananassae) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
D. ananassae
|
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| Node of Origin (family) |
D. ananassae
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Genome context
(Dana_caf1) |
scaffold_12903: 558880-558937 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUUAUUUUCAGUGCCUAGAAUUACUUAUUUUAUGAGAAGUUCUUGGGCCAGUGUUGUAUCUGAUCAUUGAUCCAUUUGCUUCUCACAUACAAGUAAUUUCUUCAGCCUCAUUAAGUGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUUAUUUUCAGUGCCUA--| AUUUUA UCU GC UUGUA
GAAUUACUU UGAGAAGU UGG CAGUG \
UUUAAUGAA ACUCUUCG ACC GUUAC U
AGUGAAUUACUCCGACUUC^ CAUAC- UUU UA UAGUC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Dan-Novel-9_5p |
| mirBase accession | None |
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| Sequence |
0- UAUGAGAAGUUCUUGGGCCAGUG -23
Get sequence
|
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| Star sequence |
Dan-Novel-9_3p* |
| mirBase accession | None |
|---|
| Sequence |
36- UUGAUCCAUUUGCUUCUCACAU -58
Get sequence
|
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