| MirGeneDB ID | Dlo-Mir-3049 |
|---|
| Family name |
MIR-3049 (all species) |
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| Seed |
CGGGAAG |
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| Species |
Braconid wasp (Diachasmimorpha longicaudata) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Bge-Mir-3049
Tca-Mir-3049
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| Node of Origin (locus) |
Neoptera
|
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| Node of Origin (family) |
Neoptera
|
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Genome context
(GCF_034640455.1_iyDiaLong2_genomic) |
NC_087237.1: 5884801-5884862 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUGUUGAGGAUGAAUUGCUGGCUGACCUGGUCGGGAAGGUAGUUGCGGCAGAUUUGCACUGUAAACAAAGUCCGUCCAACUCCUUUCCGUCUUGGCCCGUCGGUUACAACUUCAUAUCUAAU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AUGUUGAGGAUGAAUUG--| UGA U U U C A UGCACU
CUGGC CC GG CGGGAAGG AGUUG GGC GAUU G
GGCUG GG UC GCCUUUCC UCAAC CUG CUGA U
UAAUCUAUACUUCAACAUU^ CCC U U - - C AACAAA
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Dlo-Mir-3049_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UCGGGAAGGUAGUUGCGGCAGAUU -24
Get sequence
|
|---|
| Star sequence |
Dlo-Mir-3049_3p* |
| mirBase accession | None |
|---|
| Sequence |
40- UCCGUCCAACUCCUUUCCGUCU -62
Get sequence
|
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