MirGeneDB 3.0

MirGeneDB ID

Dlo-Mir-6040

Family name MIR-6040 (all species)
Seed AGUACGG
Species Braconid wasp (Diachasmimorpha longicaudata)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) D. longicaudata
Node of Origin (family) D. longicaudata
Genome context
(GCF_034640455.1_iyDiaLong2_genomic)
NC_087228.1: 9105818-9105878 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CUUAUCAAUGUUUCAUUAGCAAUCCCAAUACCUUAGUACGAGCUUGUACUGUGUUAUAUAACUAUCAUAGUACGGCUCCAGUACUGAGAAAUUGUGAUUGUUUCAAUCACUUUUUUGUAUU
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Structure
        10          20        30          40        50         
CUUAUCAAUGUUUCAUU--       C    AC        --|    U        UUAUA 
                   AGCAAUC CAAU  CUUAGUAC  GAGCU GUACUGUG     U
                   UUGUUAG GUUA  GAGUCAUG  CUCGG CAUGAUAC     A
UUAUGUUUUUUCACUAACU       U    AA        AC^    -        UAUCA 
 .       110       100        90        80         70        60
Deep sequencing
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CommentThe 5p arm might be monoadenylated at the 3' end.
3' NTU No
MotifsNo
Tissue expression
 +
Sr Sr
Star sequence

Dlo-Mir-6040_5p*

mirBase accessionNone
Sequence
0- CCUUAGUACGAGCUUGUACUGUG -23
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Mature sequence

Dlo-Mir-6040_3p

mirBase accessionNone
Sequence
37- UAGUACGGCUCCAGUACUGAGAAA -61
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