| MirGeneDB ID | Dlo-Novel-1 |
|---|
| Family name |
DLO-NOVEL-1 (all species) |
|---|
| Seed |
UCACAUU |
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| Species |
Braconid wasp (Diachasmimorpha longicaudata) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
D. longicaudata
|
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| Node of Origin (family) |
D. longicaudata
|
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Genome context
(GCF_034640455.1_iyDiaLong2_genomic) |
NC_087230.1: 10243043-10243098 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AAGAAGUGGAAUGAGAUGCCAAGGAUAUUUAUACGGUUUUUUAAUGGGAACUUGGUGGACAGAGUUCACAUUGUCAAACUGUAUGAAUAUGGUACCCAAUGUAGGUGAAUAAAAAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAGAAGUGGAAUGAGAU------| AGGA UU G UGGU
GCCA UAUUUAUACGGUUU UAAUG GAACU G
UGGU AUAAGUAUGUCAAA GUUAC CUUGA G
AAAAAAUAAGUGGAUGUAACCCA^ ---- CU A GACA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | UG at 5p(-14) |
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Tissue expression
|
|
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| Star sequence |
Dlo-Novel-1_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AUACGGUUUUUUAAUGGGAACU -22
Get sequence
|
|---|
| Mature sequence |
Dlo-Novel-1_3p |
| mirBase accession | None |
|---|
| Sequence |
34- UUCACAUUGUCAAACUGUAUGA -56
Get sequence
|
|---|
