| MirGeneDB ID | Dme-Mir-2279 |
|---|
| Family name |
MIR-2279 (all species) |
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| Seed |
UAAAUAU |
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| Species |
Fruit fly (Drosophila melanogaster) |
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| MiRBase ID |
dme-mir-2279
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
D. melanogaster
|
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| Node of Origin (family) |
D. melanogaster
|
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Genome context
(Drosophila_melanogaster_BDGP6) |
2R: 2552195-2552252 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
CGGGAGAGGAUUAUGAAAGACAAUUUGAAAUUAAAUAUCUGUGUGUGAAAUUAUUUAAAAGAUUAAUUUCACGCGAAGAUAUUUAUUUUUACAUUUGUCCCUAUAAUAACCGGGGUGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CGGGAGAGGAUUAUGAAA- UU-| U G AUUUA
GACAA UGAAA UAAAUAUCU UGUGUGAAAUU A
CUGUU AUUUU AUUUAUAGA GCGCACUUUAA A
CGUGGGGCCAAUAAUAUCC UAC^ U A UUAGA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
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| Mature sequence |
Dme-Mir-2279_5p |
| mirBase accession | MIMAT0011784 |
|---|
| Sequence |
0- UUAAAUAUCUGUGUGUGAAAUU -22
Get sequence
|
|---|
| Proposed targets |
microrna.org: MIMAT0011784
|
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| Star sequence |
Dme-Mir-2279_3p* |
| mirBase accession | MIMAT0011785 |
|---|
| Sequence |
36- UUUCACGCGAAGAUAUUUAUUU -58
Get sequence
|
|---|
| Proposed targets |
microrna.org: MIMAT0011785
|
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