| MirGeneDB ID | Dno-Mir-12087 |
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| Family name |
MIR-12087 (all species) |
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| Seed |
UAUCUGU |
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| Species |
Nine-banded armadillo (Dasypus novemcinctus) |
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| MiRBase ID |
dno-mir-12087
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
D. novemcinctus
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| Node of Origin (family) |
D. novemcinctus
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Genome context
(dasNov3) |
JH569334: 3472789-3472851 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CGAGUGGCUCAUUAGAGCCUCUGUCUCUAUAAGCAGCAUCAGGCAGAUAACUUGAUCUAAAGACUAUUUAUUUAUCUGUCCAAGGCUGCAAAUGGAGACAGAGGGAGCACCACUGAUGGAAUC
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
CGAGUGGCUCAUUAGAG--| AA AUCA CUUGAUCUAA
CCUCUGUCUCUAU GCAGC GGCAGAUAA \
GGAGACAGAGGUA CGUCG CUGUCUAUU A
CUAAGGUAGUCACCACGAG^ AA GAAC UAUUUAUCAG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Dno-Mir-12087_5p* |
| mirBase accession | MIMAT0048073 |
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| Sequence |
0- AAGCAGCAUCAGGCAGAUAACU -22
Get sequence
|
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| Mature sequence |
Dno-Mir-12087_3p |
| mirBase accession | MIMAT0048074 |
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| Sequence |
41- UUAUCUGUCCAAGGCUGCAAAU -63
Get sequence
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