MirGeneDB ID | Dsi-Mir-2583 |
Family name |
MIR-2583 (all species) |
Seed |
CGUGCAA |
Species |
Fruit fly (Drosophila simulans) |
MiRBase ID |
dsi-mir-2583
|
Paralogues |
|
Orthologues |
|
Node of Origin (locus) |
D. simulans
|
Node of Origin (family) |
D. simulans
|
Genome context (Drosophila_simulans.ASM75419v3.dna.toplevel) |
X: 6105206-6105265 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AAUUUGUGCCCGUCUCUUUUGCAGUGUGUCAAAGUUGAGUCGAUAAUGCGAUCAUCUUGUAUAAUGAUCGUGCAAUGGACUCAAUUUCGACUCGGCAAACAUCAUCAAAGCCUAAUUGAU
Get precursor sequence
|
Structure | 10 20 30 40 50
AAUUUGUGCCCGUCUCU----| AGUGU A G AA AUCUU
UUUGC GUC AAGUUGAGUC AU UGCGAUC G
AAACG CAG UUUAACUCAG UA GUGCUAG U
UAGUUAAUCCGAAACUACUAC^ GCU-- C G AC UAAUA
. 110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Dsi-Mir-2583_5p* |
mirBase accession | MIMAT0012527 |
Sequence |
0- AAAGUUGAGUCGAUAAUGCGAUC -23
Get sequence
|
Mature sequence |
Dsi-Mir-2583_3p |
mirBase accession | MIMAT0012528 |
Sequence |
37- UCGUGCAAUGGACUCAAUUUCGA -60
Get sequence
|