MirGeneDB ID | Dsi-Mir-967 |
Family name |
MIR-967 (all species) |
Seed |
GAGAUAC |
Species |
Fruit fly (Drosophila simulans) |
MiRBase ID |
dsi-mir-967
|
Paralogues |
|
Orthologues |
Dme-Mir-967
Dya-Mir-967
|
Node of Origin (locus) |
D. melanogaster subgroup
|
Node of Origin (family) |
D. melanogaster subgroup
|
Genome context (Drosophila_simulans.ASM75419v3.dna.toplevel) |
2L: 12077715-12077791 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AAACUGAGAACUGCAGGAGACUUGGAGAGCAGAGAUACCUCCGGAGAAGCGCGUGACCUGACCCCAGCAGGAGAACCCAACCCGCUUUUCCGCCUAGGUGUCUCUCUCUCUCUCUCACUCUAUCUCAGUUCCUCAGC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
AAACUGAGAACUGCAGGA--- CUU C C--| CGUGACCUGACCCCA
GA GGAGAG AGAGAUACCU CGGAGAAGCG \
CU UCUCUC UCUCUGUGGA GCCUUUUCGC G
CGACUCCUUGACUCUAUCUCA CUC - UCC^ CCAACCCAAGAGGAC
130 120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Dsi-Mir-967_5p |
mirBase accession | MIMAT0012437 |
Sequence |
0- AGAGAUACCUCCGGAGAAGCG -21
Get sequence
|
Star sequence |
Dsi-Mir-967_3p* |
mirBase accession | MIMAT0012438 |
Sequence |
54- CUUUUCCGCCUAGGUGUCUCUCU -77
Get sequence
|