MirGeneDB 2.1

MirGeneDB ID

Ebu-Mir-135-P9

Family name MIR-135 (all species)
Seed AUGGCUU
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-135-P10 
Orthologues
Node of Origin (locus) E. burgeri
Node of Origin (family) Chordata
Genome context
(Eburgeri_3)
FYBX02000030.1: 2040214-2040279 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAUGGGGAUGCUAUCCCUGCUGUGGCUUUUUAUGGCUUUUUAUUCCUACGUGAUGAGCAGAACUUGCAAGCCCCACGUAGGGGAGGAAGCCAUGGACAGCUCAGCGGAAUUGUCAGCGGAAGCAAG
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Structure
        10           20        30        40        50        60   
CAUGGGGAUGCUAUCCC---|    U    U             A          AUGAGCAGAA 
                    UGCUG GGCU UUUAUGGCUUUUU UUCCUACGUG          \
                    GCGAC UCGA AGGUACCGAAGGA GGGGAUGCAC          C
GAACGAAGGCGACUGUUAAG^    -    C             -          CCCGAACGUU 
    120       110        100        90         80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Ebu-Mir-135-P9_5p

mirBase accessionNone
Sequence
0- UAUGGCUUUUUAUUCCUACGUGA -23
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Star sequence

Ebu-Mir-135-P9_3p* (predicted)

mirBase accessionNone
Sequence
44- ACGUAGGGGAGGAAGCCAUGGA -66
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