MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-17-P3f-v1

Family name MIR-17 (all species)
Seed AAAGUGC
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-17-P1e  Ebu-Mir-17-P2e  Ebu-Mir-17-P3e  Ebu-Mir-17-P3f-v2  Ebu-Mir-17-P4e 
Orthologues
Node of Origin (locus) E. burgeri
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)		 FYBX02010282.1: 2016432-2016490 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGGAGUCGUACCACAUCGAGGACCAGGGGAAAAGUGCAAACAGUGAUAGGUGCUGCUUUAAUGUUACCUUCUCUGUUUGCACUUACCUUCUUGUCUUCCACGAUCUGCGAUUUAUGUC
Get precursor sequence
Structure
        10          20        30        40        50         
CUGGAGUCGUACCACAUC--|     C     AA            U  U    GCUGCU 
                    GAGGAC AGGGG  AAGUGCAAACAG GA AGGU      U
                    CUUCUG UCUUC  UUCACGUUUGUC CU UCCA      U
CUGUAUUUAGCGUCUAGCAC^     U     CA            U  -    UUGUAA 
       110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Ebu-Mir-17-P3f-v1_5p
mirBase accessionNone
Sequence 
0- AAAAGUGCAAACAGUGAUAGGU -22
Get sequence
Star sequence

Ebu-Mir-17-P3f-v1_3p*
mirBase accessionNone
Sequence 
38- CUUCUCUGUUUGCACUUACCU -59
Get sequence