MirGeneDB 3.0

MirGeneDB ID

Eca-Mir-7177

Family name MIR-7177 (all species)
Seed AAUGGUC
Species Horse (Equus caballus)
MiRBase ID eca-mir-7177b
Paralogues
Orthologues
Node of Origin (locus) E. caballus
Node of Origin (family) E. caballus
Genome context
(GCA_002863925.1_EquCab3.0)
CM009160.1: 16445430-16445497 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUCAUCCAUACGAAGUGAUUAGUUUCUCCAGGGCACUAGGAGACCACUUGGUAAAUUACUUUAACCAAGCACUCUAAAUGGUCCCCUAGUGCUCUGGGAAAGUUAAUCUCAUUCACCUUCCAUGGAA
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Structure
        10          20        30        40        50        60   
GCUCAUCCAUACGAAGU--|    GU  CU             A     C    UAAAUUACUU 
                   GAUUA  UU  CCAGGGCACUAGG GACCA UUGG          U
                   CUAAU  AA  GGUCUCGUGAUCC CUGGU AAUC          A
AAGGUACCUUCCACUUACU^    UG  AG             C     A    UCACGAACCA 
      120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Star sequence

Eca-Mir-7177_5p*

mirBase accessionNone
Sequence
0- AGGGCACUAGGAGACCACUUGG -22
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Mature sequence

Eca-Mir-7177_3p

mirBase accessionMIMAT0034691
Sequence
46- AAAUGGUCCCCUAGUGCUCUGG -68
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