MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-9143

Family name MIR-9143 (all species)
Seed AGACAAA
Species Horse (Equus caballus)
MiRBase ID eca-mir-9143
Paralogues
Orthologues
Node of Origin (locus) E. caballus
Node of Origin (family) E. caballus
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009179.1: 119846646-119846702 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUCCUCUUUGGUUGGUACAUUUGACCCUGAAGACAAAUCUAUGAUGCAGAUGUAAUCAUAUUCUCUGCACCGUAGGUUUGUUGUCAGGGUUAAAUGGGCUACUUUACAUGGAAGCA
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Structure
        10          20        30        40        50        
UUUCCUCUUUGGUUGGUA--|            A            A      UGUAAU 
                    CAUUUGACCCUGA GACAAAUCUAUG UGCAGA      \
                    GUAAAUUGGGACU UUGUUUGGAUGC ACGUCU      C
ACGAAGGUACAUUUCAUCGG^            G            C      CUUAUA 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er
Mature sequence

Eca-Mir-9143_5p
mirBase accessionNone
Sequence 
0- AAGACAAAUCUAUGAUGCAGA -21
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Star sequence

Eca-Mir-9143_3p*
mirBase accessionMIMAT0034716
Sequence 
36- UGCACCGUAGGUUUGUUGUCA -57
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