MirGeneDB 3.0

MirGeneDB ID

Eca-Mir-9159

Family name MIR-9159 (all species)
Seed CCUCUUU
Species Horse (Equus caballus)
MiRBase ID eca-mir-9159
Paralogues
Orthologues
Node of Origin (locus) E. caballus
Node of Origin (family) E. caballus
Genome context
(GCA_002863925.1_EquCab3.0)
CM009161.1: 46977350-46977407 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CACAUGUUACCAGCGACCCUGCUAGCCUUGUCCUCUUUCUUUGCUUCCUUCUUUUUGAAAGAUCAAGAAUGAAGCAGGGAAAGGAACAAGGAGGGACAGGUAAAGGAUUCUGGUGGUU
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Structure
        10         20         30        40        50         
CACAUGUUACCAGCGAC-    -| AG      C U             C    UUUUGA 
                  CCUG CU  CCUUGU C CUUUCUUUGCUUC UUCU      \
                  GGAC GG  GGAACA G GAAAGGGACGAAG AAGA      A
UUGGUGGUCUUAGGAAAU    A^ GA      A -             U    ACUAGA 
      110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Mature sequence

Eca-Mir-9159_5p

mirBase accessionMIMAT0034736
Sequence
0- UCCUCUUUCUUUGCUUCCUUCU -22
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Star sequence

Eca-Mir-9159_3p*

mirBase accessionNone
Sequence
37- AAUGAAGCAGGGAAAGGAACA -58
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