MirGeneDB 3.0

MirGeneDB ID

Egr-Mir-10293

Family name MIR-10293 (all species)
Seed AAUUCGA
Species Hydatid worm (Echinococcus granulosus)
MiRBase ID egr-mir-10293
Paralogues
Orthologues
Node of Origin (locus) E. granulosus
Node of Origin (family) E. granulosus
Genome context
(GCA_000524195.1_ASM52419v1_Egranulosus)
APAU02000036.1: 266799-266856 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUAGUCAUGGUCCGCGCGGUGUGCAUCCAGGGGCUCGUUUACUCGAAUUGGUCUGCGUGGGGCACUAAUUCGAGUCAACAGGGUCGUUGCUGCGCACAUUUAACGCCUCUUUUAUCUC
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Structure
        10           20        30         40        50        
UUAGUCAUGGUCCGCGCG---|      UC   G     -   U            CUGCG 
                     GUGUGCA  CAG GGCUC GUU ACUCGAAUUGGU     \
                     CACGCGU  GUU CUGGG CAA UGAGCUUAAUCA     U
CUCUAUUUUCUCCGCAAUUUA^      C-   G     A   C            CGGGG 
      110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Eg Eg Ev Ev Ad Fe Fe Hy Hy Hy Li Li Li Mi Mi Mi Po Po Po Po Po Po Po Pr Pr Pr Sm
Star sequence

Egr-Mir-10293_5p*

mirBase accessionMIMAT0041337
Sequence
0- GGGCUCGUUUACUCGAAUUGGU -22
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Mature sequence

Egr-Mir-10293_3p

mirBase accessionMIMAT0041338
Sequence
35- UAAUUCGAGUCAACAGGGUCGUU -58
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