| MirGeneDB ID | Egr-Mir-10293 |
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| Family name |
MIR-10293 (all species) |
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| Seed |
AAUUCGA |
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| Species |
Hydatid worm (Echinococcus granulosus) |
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| MiRBase ID |
egr-mir-10293
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
E. granulosus
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| Node of Origin (family) |
E. granulosus
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Genome context
(GCA_000524195.1_ASM52419v1_Egranulosus) |
APAU02000036.1: 266799-266856 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUAGUCAUGGUCCGCGCGGUGUGCAUCCAGGGGCUCGUUUACUCGAAUUGGUCUGCGUGGGGCACUAAUUCGAGUCAACAGGGUCGUUGCUGCGCACAUUUAACGCCUCUUUUAUCUC
Get precursor sequence
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| Structure | 10 20 30 40 50
UUAGUCAUGGUCCGCGCG---| UC G - U CUGCG
GUGUGCA CAG GGCUC GUU ACUCGAAUUGGU \
CACGCGU GUU CUGGG CAA UGAGCUUAAUCA U
CUCUAUUUUCUCCGCAAUUUA^ C- G A C CGGGG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Er |
Er |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
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| Star sequence |
Egr-Mir-10293_5p* |
| mirBase accession | MIMAT0041337 |
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| Sequence |
0- GGGCUCGUUUACUCGAAUUGGU -22
Get sequence
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| Mature sequence |
Egr-Mir-10293_3p |
| mirBase accession | MIMAT0041338 |
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| Sequence |
35- UAAUUCGAGUCAACAGGGUCGUU -58
Get sequence
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