| MirGeneDB ID | Esc-Mir-12500-v1 |
|---|---|
| Family name | MIR-12500 (all species) |
| Seed | UGUCGGC |
| Species | Hawaiian bobtail squid (Euprymna scolopes) |
| MiRBase ID | |
| Paralogues | Esc-Mir-12500-v2 Esc-Mir-12500-v3 |
| Orthologues | Npo-Mir-12500 Obi-Mir-12500-v1 Ovu-Mir-12500-v1 |
| Node of Origin (locus) | Cephalopoda |
| Node of Origin (family) | Cephalopoda |
| Genome context (GCA_004765925.1_miRNA_LOCI) |
|
| Precursor (pre-Mir +30nt flank) | CAAACACCCCGCCGGCUGAAAAGGGAAUUCUCUCACCUUGUCGGCUGACCGGUUGUUUGGUGet precursor sequence |
| Structure | 10 20 -- CC C- A -| AU CAAACA CCG CGGCUGA AAGG GA U GUUUGU GGC GUCGGCU UUCC CU C UG U- CA G A^ CU 60 50 40 30 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Star sequence | Esc-Mir-12500-v1_5p* |
| mirBase accession | None |
| Sequence |
0- CAAACACCCCGCCGGCUGAAAAGG -24
Get sequence
|
| Mature sequence | Esc-Mir-12500-v1_3p |
| mirBase accession | None |
| Sequence |
37- UUGUCGGCUGACCGGUUGUUUGGU -61
Get sequence
|
