| MirGeneDB ID | Esc-Mir-12507 |
|---|
| Family name |
MIR-12507 (all species) |
|---|
| Seed |
UGGCGGA |
|---|
| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Npo-Mir-12507
Obi-Mir-12507
Ovu-Mir-12507
|
|---|
| Node of Origin (locus) |
Cephalopoda
|
|---|
| Node of Origin (family) |
Cephalopoda
|
|---|
Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Novel-10_pre_SRIE01013658.1:1033644-1033784: 41-101 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GUGGUGCCUAGCGACCAGCACUGCAGGGGUGGUGGGCAACAAUUCCACCAGGACUGUCCGUCCUUCAUCCUGGCGGAUUUGAUGCCACGGCAAAUGCAGGUGCUCCAGGAGCUGGAAAAGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GUGGUGCCUAGCGACCA- -| GGG G G A U A CUGUCC
GCA CUGCA GU GUGG CA CAA UCC CCAGGA G
CGU GACGU CG CACC GU GUU AGG GGUCCU U
GGAAAAGGUCGAGGACCU G^ AAA G - A U C ACUUCC
. 110 100 90 80 70 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Esc-Mir-12507_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- GGUGGGCAACAAUUCCACCAGGA -23
Get sequence
|
|---|
| Mature sequence |
Esc-Mir-12507_3p |
| mirBase accession | None |
|---|
| Sequence |
39- CUGGCGGAUUUGAUGCCACGGC -61
Get sequence
|
|---|
