| MirGeneDB ID | Esc-Mir-12511 |
|---|
| Family name |
MIR-12511 (all species) |
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| Seed |
CCACGGU |
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| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Obi-Mir-12511
Ovu-Mir-12511
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| Node of Origin (locus) |
Coleoidea
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| Node of Origin (family) |
Coleoidea
|
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Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Novel-14_pre_SRIE01001047.1:1778200-1778462: 101-163 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AUAGAGAUUGCUAUAAACUGGCUGGUAGUACCUGAGUUUUCACUGGUGUCAGAGAGUAAAUUAGAUUUAUGACCACGGUGUAGAAUUCAGGUACCAAAAGCAAACUACCAACGAAUAUAGAAA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AUAGAGAUUGCUAUAAACUG-- GGUA -| GU GAGAGUAA
GCU GUACCUGAGUUUU CACUG GUCA A
CGA CAUGGACUUAAGA GUGGC CAGU U
AAAGAUAUAAGCAACCAUCAAA AAAC U^ AC AUUUAGAU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Star sequence |
Esc-Mir-12511_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- CCUGAGUUUUCACUGGUGUCA -21
Get sequence
|
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| Mature sequence |
Esc-Mir-12511_3p |
| mirBase accession | None |
|---|
| Sequence |
41- ACCACGGUGUAGAAUUCAGGUA -63
Get sequence
|
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