| MirGeneDB ID | Esc-Mir-12515 |
|---|
| Family name |
MIR-12515 (all species) |
|---|
| Seed |
AGAUUCG |
|---|
| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Obi-Mir-12515
Ovu-Mir-12515
|
|---|
| Node of Origin (locus) |
Coleoidea
|
|---|
| Node of Origin (family) |
Coleoidea
|
|---|
Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Novel-18_pre_SRIE01058300.1:1909880-1910023: 44-101 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AUUGUGAUAUGCAAUAUUGUUCAAGGUCCGUAGAUUCGAGUCCGGGUCGGAGAUAAAAUCUAGACUCUGACCGGAAAUCGAACCUACAAACCUUGGAUUACGAGCAGCAAUAGAUAGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUUGUGAUAUGCAAUAUU-- CC A G-| G AUAAA
GUUCAAGGU GUAG UUCGA UCCGG UCGGAG A
UAGGUUCCA CAUC AAGCU AGGCC AGUCUC U
UGAUAGAUAACGACGAGCAU AA C AA^ - AGAUC
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Esc-Mir-12515_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UAGAUUCGAGUCCGGGUCGGAG -22
Get sequence
|
|---|
| Star sequence |
Esc-Mir-12515_3p* |
| mirBase accession | None |
|---|
| Sequence |
36- CUGACCGGAAAUCGAACCUACA -58
Get sequence
|
|---|
