MirGeneDB 3.0

MirGeneDB ID

Esc-Mir-12521-v2

Family name MIR-12521 (all species)
Seed UUUAGUG
Species Hawaiian bobtail squid (Euprymna scolopes)
MiRBase ID
Paralogues Esc-Mir-12521-v1  Esc-Mir-12521-v3 
Orthologues Obi-Mir-12521-v2  Ovu-Mir-12521-v2 
Node of Origin (locus) Coleoidea
Node of Origin (family) Coleoidea
Genome context
(GCA_004765925.1_miRNA_LOCI)
Precursor
(pre-Mir +30nt flank)
AGCUGGUUAUGUGAACUAAGAUUCAUUUCUUUAUCAAAUAUUUAGUGCACAUAACUGGCUGA
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Structure
          10        20           
--   UG        A      -|  CAUUUC 
  AGC  GUUAUGUG ACUAAG AUU      \
  UCG  CAAUACAC UGAUUU UAA      U
AG   GU        G      A^  ACUAUU 
 60        50        40
Deep sequencing
3' NTU No
MotifsNo
Star sequence

Esc-Mir-12521-v2_5p*

mirBase accessionNone
Sequence
0- AGCUGGUUAUGUGAACUAAGAUU -23
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Mature sequence

Esc-Mir-12521-v2_3p

mirBase accessionNone
Sequence
39- AUUUAGUGCACAUAACUGGCUGA -62
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