| MirGeneDB ID | Esc-Mir-12528 |
|---|
| Family name |
MIR-12528 (all species) |
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| Seed |
ACGUGUC |
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| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Obi-Mir-12528
Ovu-Mir-12528
|
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| Node of Origin (locus) |
Coleoidea
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| Node of Origin (family) |
Coleoidea
|
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Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Novel-31_pre_SRIE01017536.1:696587-696851: 101-165 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UCUUCCUACUGUAUCAAAAGUAGUCCGGCUUACGUGUCACCUACAGCCAUGCUUGUCAGCUAUUGGAUACAGCAUGGCAUAUGUGACCCGCUUAGUCGAGGCGUACAGUGUUCGACAGCUACUAA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UCUUCCUACUGUAUCAAAA - - UA-| U C CA UGUCAGCU
GUA GUC CGGCU CG GUCAC UA GCCAUGCU \
CAU CGG GCUGA GC CAGUG AU CGGUACGA A
AAUCAUCGACAGCUUGUGA G A UUC^ C U A- CAUAGGUU
120 110 100 90 80 70 |
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| Deep sequencing |
|
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
|
|
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| Mature sequence |
Esc-Mir-12528_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UACGUGUCACCUACAGCCAUGCU -23
Get sequence
|
|---|
| Star sequence |
Esc-Mir-12528_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
42- CAUGGCAUAUGUGACCCGCUUAG -65
Get sequence
|
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