| MirGeneDB ID | Esc-Novel-7 |
|---|
| Family name |
ESC-NOVEL-7 (all species) |
|---|
| Seed |
UGAGCCC |
|---|
| Species |
Hawaiian bobtail squid (Euprymna scolopes) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
|
|---|
| Node of Origin (locus) |
E. scolopes
|
|---|
| Node of Origin (family) |
E. scolopes
|
|---|
Genome context
(GCA_004765925.1_miRNA_LOCI) |
Esc-Novel-62_pre_SRIE01052252.1:1810435-1810694: 101-160 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UCUUCACACUGGAAUCGAAUGCUCCCUUUGCGCGACUCCGACGGGUCCCCUACUUAAAGUUCGACGUAGUGAGCCCGUUGGAGUCGGGCUCGGUGAGUCUUCCACGCUUCGACCAUUCUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UCUUCACACUGGAAUCGAAU-- -| UUU G CCC CUUAAA
GCUC CC GC CGACUCCGACGGGU CUA G
UGAG GG CG GCUGAGGUUGCCCG GAU U
AUCUUACCAGCUUCGCACCUUC U^ CU- G AGU GCAGCU
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Esc-Novel-7_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- CGCGACUCCGACGGGUCCCCUA -22
Get sequence
|
|---|
| Mature sequence |
Esc-Novel-7_3p |
| mirBase accession | None |
|---|
| Sequence |
38- GUGAGCCCGUUGGAGUCGGGCU -60
Get sequence
|
|---|
