| MirGeneDB ID | Ete-Novel-1 |
|---|
| Family name |
ETE-NOVEL-1 (all species) |
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| Seed |
AAAAGCG |
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| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
E. telfairi
|
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| Node of Origin (family) |
E. telfairi
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Genome context
(echTel2) |
JH980293: 67758018-67758077 [+]
UCSC
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Precursor
(pre-Mir +30nt flank) |
UGCAGGCACAGACGUACGCGAGGGGGCUUCUAAAAGCGUGUGGCAAAGCUCAGUUGUCUUGUAAUUCCAGCUUCUCCACACGCUUUUUGAAGCCUGCUCGUCAGUGGCUGCUGUGUUUAG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UGCAGGCACAGACGUAC--| G U CA CAGUUGUC
GCGAG GGGCUUC AAAAGCGUGUGG AAGCU U
UGCUC UCCGAAG UUUUCGCACACC UUCGA U
GAUUUGUGUCGUCGGUGAC^ G U UC CCUUAAUG
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Ete-Novel-1_5p |
| mirBase accession | None |
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| Sequence |
0- UAAAAGCGUGUGGCAAAGCUCA -22
Get sequence
|
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| Star sequence |
Ete-Novel-1_3p* |
| mirBase accession | None |
|---|
| Sequence |
38- AGCUUCUCCACACGCUUUUUGA -60
Get sequence
|
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