MirGeneDB 3.0

MirGeneDB ID

Gga-Mir-12265

Family name MIR-12265 (all species)
Seed UGGCUGU
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-12265
Paralogues
Orthologues
Node of Origin (locus) G. gallus
Node of Origin (family) G. gallus
Genome context
(Gallus_gallus.GRCg6a)
3: 96496738-96496796 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGAGGAGCGAUCCCACGGAGCGCGCUGCGAUGGCUGUGAGUGCGGCUGAGGUGUCAGAGCAUCCUCCUCAGCCGUCUUGCAGCCUCCUCAGCCCAUGCGCUGCUAUUUUCUGAGUCAU
Get precursor sequence
Structure
        10        20             30        40        50         
CAGAGGAGCGAUCCCACGGA    ----    C-| U     UG  U          UGUCAG 
                    GCGC    GCUG  GA GGCUG  AG GCGGCUGAGG      A
                    CGCG    CGAC  CU CCGAC  UC UGCCGACUCC      G
UACUGAGUCUUUUAUCGU--    UACC    UC^ -     GU  -          UCCUAC 
       110         100        90         80         70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUGUG in loop
Tissue expression
 +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-12265_5p

mirBase accessionMIMAT0050020
Sequence
0- AUGGCUGUGAGUGCGGCUGAGG -22
Get sequence
Star sequence

Gga-Mir-12265_3p*

mirBase accessionMIMAT0050021
Sequence
38- UCAGCCGUCUUGCAGCCUCCU -59
Get sequence