| MirGeneDB ID | Gga-Mir-12277 |
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| Family name |
MIR-12277 (all species) |
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| Seed |
UUGGGUG |
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| Species |
Chicken (Gallus gallus) |
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| MiRBase ID |
gga-mir-12277
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
G. gallus
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| Node of Origin (family) |
G. gallus
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Genome context
(Gallus_gallus.GRCg6a) |
5: 348189-348254 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CCACCCCUCUGAGCUUUGGGAUCUGUGCUGGGACGGGGCUGGGAUCCAGGACCUGCUGCGGGCAUUGGAAGUGUUUUGGGUGCCAGCCCCGUUGCGGUGCAUCAUCCAUACGUCUGUCUCUAUAUA
Get precursor sequence
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| Structure | 10 20 30 40 50 60
CCACCCCUCUGAGCUUUG- C-| UG G G CUGCUGCGG
GGAU UG CUG GACGGGGCUGG AUCCAGGAC G
CCUA AC GGC UUGCCCCGACC UGGGUUUUG C
AUAUAUCUCUGUCUGCAUA CU^ GU G G UGAAGGUUA
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UG at 5p(-14) |
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Tissue expression
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| Ad |
Ad |
Ad |
Br |
Br |
Ce |
Ce |
Ce |
Ce |
Gg |
He |
He |
Hy |
Hy |
Ki |
Ki |
Li |
Li |
Lu |
Lu |
Ov |
Pr |
Pr |
Sc |
Sc |
Sp |
Sp |
Te |
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| Star sequence |
Gga-Mir-12277_5p* |
| mirBase accession | MIMAT0050048 |
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| Sequence |
0- GGACGGGGCUGGGAUCCAGGAC -22
Get sequence
|
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| Mature sequence |
Gga-Mir-12277_3p |
| mirBase accession | MIMAT0050049 |
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| Sequence |
44- UUUGGGUGCCAGCCCCGUUGCG -66
Get sequence
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