MirGeneDB 3.0

MirGeneDB ID

Gga-Mir-1452

Family name MIR-1452 (all species)
Seed UGAGAUA
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-1452
Paralogues
Orthologues
Node of Origin (locus) G. gallus
Node of Origin (family) G. gallus
Genome context
(Gallus_gallus.GRCg6a)
Z: 66646493-66646555 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUAAUAUGGUUGCCUCUGUUAGGGACUGUCUUGAGAUAAGACAGAGGAUAUUAAGCCUGAAAUAAAAAUAAUAUCCUUCUUUCUUGUCUUUUAGUCUCACCUCAAGGAUAUUCAAAGUGCAUU
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Structure
        10        20            30        40         50        60 
UUAAUAUGGUUGCCUCUGUUA----|      UCUU         C   -        AGCCUGA 
                         GGGACUG    GAGAUAAGA AGA GGAUAUUA       \
                         CUCUGAU    UUCUGUUCU UCU CCUAUAAU       A
UUACGUGAAACUUAUAGGAACUCCA^      U---         U   U        AAAAAUA 
 120       110       100           90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-1452_5p

mirBase accessionMIMAT0007328
Sequence
0- UUGAGAUAAGACAGAGGAUAUUA -23
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Proposed targets TargetScanVert: gga-miR-1452
miRDB: MIMAT0007328
Star sequence

Gga-Mir-1452_3p*

mirBase accessionNone
Sequence
40- AUAUCCUUCUUUCUUGUCUUUUA -63
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