MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-1553

Family name MIR-1553 (all species)
Seed GUGGUGG
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-1553
Paralogues
Orthologues
Node of Origin (locus) G. gallus
Node of Origin (family) G. gallus
Genome context
(Gallus_gallus.GRCg6a)		 7: 23744593-23744649 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCAGGAGGACCAGUUGGCAGCUCUCACACAGUCCUGUCCUGUCUACCUACUGUCUGUCCUGUCCUGUGGUGGGAGGACAGUGAUGUGGGAGAGGGCCACUUUCAGCUUUGCUCUUU
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Structure
        10           20        30         40        50         
CCCAGGAGGACCAGUUG---| AG     A    G  -       G      U  UGUCUGU 
                    GC  CUCUC CACA UC CUGUCCU UCUACC AC       \
                    CG  GAGAG GUGU AG GACAGGA GGGUGG UG       C
UUUCUCGUUUCGACUUUCAC^ G-     G    -  U       -      -  UCCUGUC 
     110       100         90         80         70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-1553_5p*
mirBase accessionMIMAT0007409
Sequence 
0- AGUCCUGUCCUGUCUACCUACUGU -24
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Proposed targets TargetScanVert: gga-miR-1553-5p
miRDB: MIMAT0007409
Mature sequence

Gga-Mir-1553_3p
mirBase accessionMIMAT0007410
Sequence 
35- UGUGGUGGGAGGACAGUGAUGU -57
Get sequence
Proposed targets TargetScanVert: gga-miR-1553-3p
miRDB: MIMAT0007410