MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-1555

Family name MIR-1555 (all species)
Seed AGGGUUA
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-1555
Paralogues
Orthologues
Node of Origin (locus) G. gallus
Node of Origin (family) G. gallus
Genome context
(Gallus_gallus.GRCg6a)		 1: 146371379-146371439 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CACAUGGUGGAGUUUCGAAGGUGUGAAGUCAGCAAACCCUUCACCCUGCCGUGUUCCCUUCAUGCCAGGCAGGGUUAUUGGUUUUGUGUGACAUCGCAUCUCUUCCUGAGAUGUCUUUUUC
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Structure
        10          20        30         40         50         
CACAUGGUGGAGUUUCGA--        A    -     C  UUC-|       GUGUUCCC 
                    AGGUGUGA GUCA GCAAA CC    ACCCUGCC        \
                    UCUACGCU CAGU UGUUU GG    UGGGACGG        U
CUUUUUCUGUAGAGUCCUUC        A    G     U  UUAU^       ACCGUACU 
 .       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-1555_5p*
mirBase accessionMIMAT0026774
Sequence 
0- AGCAAACCCUUCACCCUGCC -20
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Proposed targets TargetScanVert: gga-miR-1555-5p
miRDB: MIMAT0026774
Mature sequence

Gga-Mir-1555_3p
mirBase accessionMIMAT0007412
Sequence 
39- CAGGGUUAUUGGUUUUGUGUGA -61
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Proposed targets TargetScanVert: gga-miR-1555-3p
miRDB: MIMAT0007412