MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-1560

Family name MIR-1560 (all species)
Seed GCAUCUC
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-1560
Paralogues
Orthologues
Node of Origin (locus) G. gallus
Node of Origin (family) G. gallus
Genome context
(Gallus_gallus.GRCg6a)		 11: 18630380-18630438 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCACGGCUCCUUAGUCACUGCGUGGGGGUGGCGGCGCGAGCAGAGAGGCGCUGCCGUGUCCAAAGCAGCAUCUCUGGACGCGCUCGUUCCUUCUGCGUGGCUCCGCUUGGAUGUGUGCA
Get precursor sequence
Structure
        10          20        30         40         50        
GCACGGCUCCUUAGUCA-- UG  UG    UG   -     AG      G  -|  GCCGU 
                   C  CG  GGGG  GCG GCGCG  CAGAGA GC GCU     \
                   G  GC  CUUC  UGC CGCGC  GUCUCU CG CGA     G
ACGUGUGUAGGUUCGCCUC GU  GU    CU   U     AG      A  A^  AACCU 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-1560_5p*
mirBase accessionMIMAT0007417
Sequence 
0- GCGGCGCGAGCAGAGAGGCGCU -22
Get sequence
Proposed targets TargetScanVert: gga-miR-1560-5p
miRDB: MIMAT0007417
Mature sequence

Gga-Mir-1560_3p
mirBase accessionMIMAT0007418
Sequence 
36- AGCAUCUCUGGACGCGCUCGUUC -59
Get sequence
Proposed targets TargetScanVert: gga-miR-1560-3p
miRDB: MIMAT0007418