MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-1596

Family name MIR-1596 (all species)
Seed UUCUCCU
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-1596
Paralogues
Orthologues
Node of Origin (locus) G. gallus
Node of Origin (family) G. gallus
Genome context
(Gallus_gallus.GRCg6a)		 1: 6347558-6347621 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UACAGCAGGUGCAUCUAUGGACUUUGUUUCAUUCUCCUUCAAUCCAUCUUUGUCAUGAUUUACAAAAAGAACAAAGGUGGCCAUGGGUGAAUGAAGCCAGGCAUCCAAAAAGAAUGAAGGUGAA
Get precursor sequence
Structure
        10        20          30        40        50        60  
UACAGCAGGUGCAUCUAU   --|  U         U   UCAAU          CAUGAUUU 
                  GGA  CUU GUUUCAUUC CCU     CCAUCUUUGU        \
                  CCU  GGA CGAAGUAAG GGG     GGUGGAAACA        A
AAGUGGAAGUAAGAAAAA   AC^  C         U   UACC-          AGAAAAAC 
  120       110       100        90         80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-1596_5p
mirBase accessionMIMAT0007460
Sequence 
0- AUUCUCCUUCAAUCCAUCUUUGU -23
Get sequence
Proposed targets TargetScanVert: gga-miR-1596-5p
miRDB: MIMAT0007460
Star sequence

Gga-Mir-1596_3p*
mirBase accessionMIMAT0007461
Sequence 
42- AAAGGUGGCCAUGGGUGAAUGA -64
Get sequence
Proposed targets TargetScanVert: gga-miR-1596-3p
miRDB: MIMAT0007461