MirGeneDB 3.0

MirGeneDB ID

Gga-Mir-1663

Family name MIR-1663 (all species)
Seed ACCGCUG
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-1663
Paralogues
Orthologues
Node of Origin (locus) G. gallus
Node of Origin (family) G. gallus
Genome context
(Gallus_gallus.GRCg6a)
5: 16028827-16028883 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUGCUGAUGAUUCAGGAGGGCAGUGUUGGGUACCGCUGUCCUGGGUGCCUGGCAGAGCUCGUGCACUGGCAUCCAGAACAGCGGUACCCAAGGUUGCUCACGUGCUACUGGAGCAUG
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Structure
        10         20        30        40        50         
AUGCUGAUGAUUCAGGA-      UG              C         UG-|CAGAG 
                  GGGCAG  UUGGGUACCGCUGU CUGGGUGCC   G     \
                  CUCGUU  AACCCAUGGCGACA GACCUACGG   C     C
GUACGAGGUCAUCGUGCA      GG              A         UCA^GUGCU 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-1663_5p

mirBase accessionMIMAT0007544
Sequence
0- UACCGCUGUCCUGGGUGCCUGG -22
Get sequence
Proposed targets TargetScanVert: gga-miR-1663-5p
miRDB: MIMAT0007544
Co-mature sequence

Gga-Mir-1663_3p

mirBase accessionMIMAT0007545
Sequence
36- UGGCAUCCAGAACAGCGGUAC -57
Get sequence
Proposed targets TargetScanVert: gga-miR-1663-3p
miRDB: MIMAT0007545