MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-1685

Family name MIR-1685 (all species)
Seed CAGUAAU
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-1685
Paralogues
Orthologues
Node of Origin (locus) G. gallus
Node of Origin (family) G. gallus
Genome context
(Gallus_gallus.GRCg6a)		 2: 24783243-24783306 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAACUUAUCUUGGUUUUUUAGUGGCACAGUUGGAGUCACUACCAGUGCUGUGUUUGACUACGUAUGUAACCACAGUAAUGGUAUGAACUCAGAUGUGCUACAGAAAUGUAUAAUCCGAGUUUUU
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Structure
        10        20           30         40        50        60 
AAACUUAUCUUGGUUUUUUA---|       GUUG    -  C     G       UUUGACUA 
                       GUGGCACA    GAGU CA UACCA UGCUGUG        C
                       CAUCGUGU    CUCA GU AUGGU AUGACAC        G
UUUUUGAGCCUAAUAUGUAAAGA^       AGA-    A  -     A       CAAUGUAU 
  120       110       100         90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-1685_5p*
mirBase accessionMIMAT0007573
Sequence 
0- UGGAGUCACUACCAGUGCUGUGU -23
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Proposed targets TargetScanVert: gga-miR-1685-5p
miRDB: MIMAT0007573
Mature sequence

Gga-Mir-1685_3p
mirBase accessionMIMAT0007574
Sequence 
41- ACAGUAAUGGUAUGAACUCAGAU -64
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Proposed targets TargetScanVert: gga-miR-1685-3p
miRDB: MIMAT0007574