MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-1689

Family name MIR-1689 (all species)
Seed CGGUGAC
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-1689
Paralogues
Orthologues
Node of Origin (locus) G. gallus
Node of Origin (family) G. gallus
Genome context
(Gallus_gallus.GRCg6a)		 19: 9540181-9540243 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGCACCUGGUGUUAUGUCUGGGCAGAAGAUCUCUGCUUACAGUGUCUGGGGGGAUCAUGCGGCAGCCCCGGUGACUGGAAGCAGCGUUGACUUCUGGGCAGUUCUGUCUCCCAGGACAGAGU
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Structure
        10           20        30           40        50         
CAGCACCUGGUGUUAUGU---   GG      A  U---|     A    GU      GGAUCA 
                     CUG  CAGAAG UC    CUGCUU CAGU  CUGGGG      U
                     GAC  GUCUUC AG    GACGAA GUCA  GGCCCC      G
UGAGACAGGACCCUCUGUCUU   GG      -  UUGC^     G    GU      GACGGC 
 120       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-1689_5p*
mirBase accessionMIMAT0007579
Sequence 
0- UCUCUGCUUACAGUGUCUGGGG -22
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Proposed targets TargetScanVert: gga-miR-1689-5p
miRDB: MIMAT0007579
Mature sequence

Gga-Mir-1689_3p
mirBase accessionMIMAT0007580
Sequence 
38- CCGGUGACUGGAAGCAGCGUUGACU -63
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Proposed targets TargetScanVert: gga-miR-1689-3p
miRDB: MIMAT0007580