MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-1728

Family name MIR-1728 (all species)
Seed GGCUUCU
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-1728
Paralogues
Orthologues
Node of Origin (locus) G. gallus
Node of Origin (family) G. gallus
Genome context
(Gallus_gallus.GRCg6a)		 4: 10929477-10929544 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUUGUUGCUGCAGUGUGAAUUAGUUCAUCUGGUUGAUCCAUUGGAAGACUGAGCUUGAGGGUGAAAGAGGUAAACAGGCUUCUGUAGAUCAGCCAGCUGACCUGAUUCAUCUUACUCAAAGGAUGCA
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Structure
        10          20        30        40        50        60    
UCUUGUUGCUGCAGUGU--|      U   U          CAU      A   AGCUUGAGGGU 
                   GAAUUAG UCA CUGGUUGAUC   UGGAAG CUG           \
                   CUUAGUC AGU GACCGACUAG   GUCUUC GAC           G
ACGUAGGAAACUCAUUCUA^      C   C          AU-      G   AAAUGGAGAAA 
      120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-1728_5p*
mirBase accessionMIMAT0007627
Sequence 
0- UGGUUGAUCCAUUGGAAGACUGA -23
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Proposed targets TargetScanVert: gga-miR-1728-5p
miRDB: MIMAT0007627
Mature sequence

Gga-Mir-1728_3p
mirBase accessionMIMAT0007628
Sequence 
46- AGGCUUCUGUAGAUCAGCCAGC -68
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Proposed targets TargetScanVert: gga-miR-1728-3p
miRDB: MIMAT0007628