| MirGeneDB ID | Gsa-Mir-9391 |
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| Family name |
MIR-9391 (all species) |
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| Seed |
UCCAUGU |
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| Species |
Russian doll killer (Gyrodactylus salaris) |
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| MiRBase ID |
gsa-mir-9391
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
G. salaris
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| Node of Origin (family) |
G. salaris
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Genome context
(gyrodactylus_salaris.PRJNA244375.WBPS19.genomic) |
scf7180006953254: 15392-15469 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCUUGUCGCUCAGUAUGUCUUGAAUUGUUGAUCCAUGUUUUAGAAAAUGGUGGAUUAUUGAUUUUUAUUUGGAUAAUUUCACCACCGUUGUCUGUGAACAUGUGUAAACUUUGGAGAUCAAACGUCUUUGAAAAAAAA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GCUUGUCGCUCAGUAUG----| G UU G UC - A AUUAUUGAUUUUU
UCUU AA GUU A CAUGUUU UAGA AAUGGUGG A
AGAG UU CAA U GUACAAG GUCU UUGCCACC U
AAAAAAAAGUUUCUGCAAACU^ G U- A GU U G ACUUUAAUAGGUU
130 120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Mature sequence |
Gsa-Mir-9391_5p |
| mirBase accession | MIMAT0035326 |
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| Sequence |
0- AUCCAUGUUUUAGAAAAUGGUGG -23
Get sequence
|
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| Star sequence |
Gsa-Mir-9391_3p* |
| mirBase accession | MIMAT0035327 |
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| Sequence |
53- ACCGUUGUCUGUGAACAUGUGUAAA -78
Get sequence
|
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