MirGeneDB 3.0
MirGeneDB ID

Gsa-Mir-9397

Family name MIR-9397 (all species)
Seed GAUGUAU
Species Russian doll killer (Gyrodactylus salaris)
MiRBase ID gsa-mir-9397
Paralogues
Orthologues
Node of Origin (locus) G. salaris
Node of Origin (family) G. salaris
Genome context
(gyrodactylus_salaris.PRJNA244375.WBPS19.genomic)		 scf7180006950538: 29715-29789 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUUAAAGAAAAAUUUAAAACGUGGACUCGGAGAUGUAUUCUUGGCACGAGAACCCAACAAUCGACUCUCUAUCGAUUUCAAAUCUCGGCUAAAAUUGCAUCGCUUUGUCACGCUUUGACCUUCCAGAUUUGAGAC
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Structure
        10        20           30        40        50        60       
AUUAAAGAAAAAUUUAAAAC--   -|  UC  A      UUC     A     ACCCAACAAUCGACU 
                      GUG GAC  GG GAUGUA   UUGGC CGAGA               \
                      CGC CUG  UC CUACGU   AAUCG GCUCU               C
CAGAGUUUAGACCUUCCAGUUU   A^  UU  G      UAA     -     AAACUUUAGCUAUCU 
   130       120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Gsa-Mir-9397_5p
mirBase accessionMIMAT0035340
Sequence 
0- AGAUGUAUUCUUGGCACGAGAAC -23
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Co-mature sequence

Gsa-Mir-9397_3p
mirBase accessionMIMAT0035341
Sequence 
52- UCUCGGCUAAAAUUGCAUCGCUU -75
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