MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-3942

Family name MIR-3942 (all species)
Seed GCAAUAC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-3942
Paralogues
Orthologues
Node of Origin (locus) H. sapiens
Node of Origin (family) H. sapiens
Genome context
(hg38)
chr15: 35372279-35372341 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGAUUGGUCUUCAGUAUGACACCUCAAAGAAGCAAUACUGUUACCUGAAAUAGGCUGCGAAGAUAACAGUAUUUCAGAUAACAGUAUUACAUCUUUGAAGUGUCAUAUUCACUGACACUGAAU
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Structure
        10          20        30        40        50        60 
UGAUUGGUCUUCAGUAU--|    C       AGC          C        GGCUGCGA 
                   GACAC UCAAAGA   AAUACUGUUA CUGAAAUA        \
                   CUGUG AGUUUCU   UUAUGACAAU GACUUUAU        A
UAAGUCACAGUCACUUAUA^    A       ACA          A        GACAAUAG 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 3- 3- 3- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 5- 5- 5- 5- 5- 5- 5- 6- 6- 6- 6- 6-
Mature sequence

Hsa-Mir-3942_5p

mirBase accessionMIMAT0018358
Sequence
0- AGCAAUACUGUUACCUGAAAUA -22
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Proposed targets TargetScanVert: hsa-miR-3942-5p
TargetMiner: hsa-miR-3942-5p
miRDB: MIMAT0018358
Co-mature sequence

Hsa-Mir-3942_3p

mirBase accessionMIMAT0019230
Sequence
41- UUUCAGAUAACAGUAUUACAUC -63
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Proposed targets TargetScanVert: hsa-miR-3942-3p
TargetMiner: hsa-miR-3942-3p
miRDB: MIMAT0019230