MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-3944

Family name MIR-3944 (all species)
Seed UCGGGCU
Species Human (Homo sapiens)
MiRBase ID hsa-mir-3944
Paralogues
Orthologues
Node of Origin (locus) H. sapiens
Node of Origin (family) H. sapiens
Genome context
(hg38)
chr10: 133371579-133371641 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUUGCUGUCCACCCAGCAGGCGCAGGUCCUGUGCAGCAGGCCAACCGAGAAGCGCCUGCGUCUCCCAUUUUCGGGCUGGCCUGCUGCUCCGGACCUGUGCCUGAUCUUAAUGCUGCAGGAAC
Get precursor sequence
Structure
        10          20        30        40         50        60
CCUUGCUGUCCACCCAG--             UGU           A-|      GCGCCUG 
                   CAGGCGCAGGUCC   GCAGCAGGCCA  CCGAGAA       C
                   GUCCGUGUCCAGG   CGUCGUCCGGU  GGCUUUU       G
CAAGGACGUCGUAAUUCUA             CCU           CG^      ACCCUCU 
 120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-3944_5p*

mirBase accessionMIMAT0019231
Sequence
0- UGUGCAGCAGGCCAACCGAGAA -22
Get sequence
Proposed targets TargetScanVert: hsa-miR-3944-5p
TargetMiner: hsa-miR-3944-5p
miRDB: MIMAT0019231
Mature sequence

Hsa-Mir-3944_3p

mirBase accessionMIMAT0018360
Sequence
40- UUCGGGCUGGCCUGCUGCUCCGG -63
Get sequence
Proposed targets TargetScanVert: hsa-miR-3944-3p
TargetMiner: hsa-miR-3944-3p
miRDB: MIMAT0018360