MirGeneDB 2.1

MirGeneDB ID

Hsa-Novel-3

Family name CAT-NOVEL-3 (all species)
Seed AAAGCUG
Species Human (Homo sapiens)
MiRBase ID
Paralogues
Orthologues Mml-Novel-3 
Node of Origin (locus) Catarrhini
Node of Origin (family) Catarrhini
Genome context
(hg38)
chr9: 32456303-32456370 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAACAUAAAGCCAUUUUUAUGCUUACUACUAAAAGCUGUCCACUGUAGAGUUGCUGUAUGUAGCAAUGUGUAUCCACUCUACAGUGGUCAGCUUUUAGUAGAGAGCAUAAAAAUGAUAAAAUACUUCU
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Structure
        10          20        30        40        50        60   
GAACAUAAAGCCAUUUU--|      A             U            UGCUGUAUGUA 
                   UAUGCUU CUACUAAAAGCUG CCACUGUAGAGU           G
                   AUACGAG GAUGAUUUUCGAC GGUGACAUCUCA           C
UCUUCAUAAAAUAGUAAAA^      A             U            CCUAUGUGUAA 
      120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 3- 3- 3- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 5- 5- 5- 5- 5- 5- 5- 6- 6- 6- 6- 6-
Mature sequence

Hsa-Novel-3_5p

mirBase accessionNone
Sequence
0- AAAAGCUGUCCACUGUAGAGUU -22
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Star sequence

Hsa-Novel-3_3p*

mirBase accessionNone
Sequence
46- CUCUACAGUGGUCAGCUUUUAG -68
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