| MirGeneDB ID | Laf-Novel-1 |
|---|---|
| Family name | LAF-NOVEL-1 (all species) |
| Seed | GGAGUCA |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | |
| Node of Origin (locus) | L. africana |
| Node of Origin (family) | L. africana |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010100.1: 2231395-2231452 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AACAACUAUAAAUUGCUAAUUAUUGGCACCAGGAGUCAAAACCAGGUCCUGCCUGGUCCGAAUUGCAGGACCUGAUUUUGACUCCUGGUGCCAUUGUUUACUAGCUAUGUGACCUUCAGet precursor sequence |
| Structure | 10 20 30 40 50 AACAACUAUAAAUUGCUAAUUAU--| C CUGGU UGGCACCAGGAGUCAAAA CAGGUCCUGC C ACCGUGGUCCUCAGUUUU GUCCAGGACG C ACUUCCAGUGUAUCGAUCAUUUGUU^ A UUAAG 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Mature sequence | Laf-Novel-1_5p |
| mirBase accession | None |
| Sequence |
0- AGGAGUCAAAACCAGGUCCUGC -22
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|
| Co-mature sequence | Laf-Novel-1_3p |
| mirBase accession | None |
| Sequence |
36- AGGACCUGAUUUUGACUCCUGG -58
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|
