| MirGeneDB ID | Laf-Novel-3 |
|---|---|
| Family name | LAF-NOVEL-3 (all species) |
| Seed | GGUCCUC |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | |
| Node of Origin (locus) | L. africana |
| Node of Origin (family) | L. africana |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010172.1: 878270-878326 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GCCUGCCGGGCCAGCGGGCUCUUCUCUCUCUGGUCCUCGGUCCACUGGUCUUCUGGAAGAAGGAGGACGAGGGUGCCGAGGGCCGGCGAGAGGACGUGGCCAGCCUCCCGGUAGAGCGet precursor sequence |
| Structure | 10 20 30 40 50 GCCUGCCGGGCCAGCGG---| UC U - A G UGGA GC UUCUCUC CUGGUCCUCGGU CC CU GUCUUC \ UG AGGAGAG GGCCGGGAGCCG GG GA CAGGAG A CGAGAUGGCCCUCCGACCGG^ C- C U - G GAAG 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Laf-Novel-3_5p |
| mirBase accession | None |
| Sequence |
0- UGGUCCUCGGUCCACUGGUCUUC -23
Get sequence
|
| Star sequence | Laf-Novel-3_3p* |
| mirBase accession | None |
| Sequence |
34- GGACGAGGGUGCCGAGGGCCGGC -57
Get sequence
|
