| MirGeneDB ID | Laf-Novel-3 |
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| Family name |
LAF-NOVEL-3 (all species) |
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| Seed |
GGUCCUC |
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| Species |
African bush elephant (Loxodonta africana) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
L. africana
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| Node of Origin (family) |
L. africana
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Genome context
(GCA_000001905.1_Loxafr3.0) |
GL010172.1: 878270-878326 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCCUGCCGGGCCAGCGGGCUCUUCUCUCUCUGGUCCUCGGUCCACUGGUCUUCUGGAAGAAGGAGGACGAGGGUGCCGAGGGCCGGCGAGAGGACGUGGCCAGCCUCCCGGUAGAGC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GCCUGCCGGGCCAGCGG---| UC U - A G UGGA
GC UUCUCUC CUGGUCCUCGGU CC CU GUCUUC \
UG AGGAGAG GGCCGGGAGCCG GG GA CAGGAG A
CGAGAUGGCCCUCCGACCGG^ C- C U - G GAAG
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Laf-Novel-3_5p |
| mirBase accession | None |
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| Sequence |
0- UGGUCCUCGGUCCACUGGUCUUC -23
Get sequence
|
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| Star sequence |
Laf-Novel-3_3p* |
| mirBase accession | None |
|---|
| Sequence |
34- GGACGAGGGUGCCGAGGGCCGGC -57
Get sequence
|
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