| MirGeneDB ID | Lhy-Novel-1 |
|---|
| Family name |
LHY-NOVEL-1 (all species) |
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| Seed |
UUUCCAG |
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| Species |
Laevipilina (Monoplacophora) (Laevipilina hyalina) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
L. hyalina
|
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| Node of Origin (family) |
L. hyalina
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Genome context
(Mono_atcgn_nospaces) |
scaffold289268_16.4: 744-802 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CUUCAGGAUGAUCUUUCAAAUGUUUGACAUUUUUCCAGCACCCGCGGUGAGACUCGUAAUUACUAUCUCGCCUUCGUACUGGGAAAAGUGUCUGACACUCUUACGGCAACAGCAGUUCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CUUCAGGAUGAUCUUUCAAA-- U -| C CCGC CUCGUA
UGUU GACAUUUUU CCAG AC GGUGAGA \
ACAG CUGUGAAAA GGUC UG CCGCUCU A
UCUUGACGACAACGGCAUUCUC U G^ A CUU- AUCAUU
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Mature sequence |
Lhy-Novel-1_5p |
| mirBase accession | None |
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| Sequence |
0- UUUUCCAGCACCCGCGGUGAGA -22
Get sequence
|
|---|
| Star sequence |
Lhy-Novel-1_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- UCGCCUUCGUACUGGGAAAAGU -59
Get sequence
|
|---|
