MirGeneDB 3.0

MirGeneDB ID

Mal-Novel-4

Family name MAL-NOVEL-4 (all species)
Seed GGAAUCG
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues
Orthologues
Node of Origin (locus) M. albus
Node of Origin (family) M. albus
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)
KV884822.1: 2338967-2339023 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGAGUCUUCUGAUGAGCUGCUCGUUUUGGGACUUUUCCUUUCUGAUUGUUUGCUGCUUAACACGAGGAAUCGGAGGGAAAAGAUCCAAACUGGACAAACCAACUUUCUUCAGAACU
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Structure
        10          20        30        40        50        
UGGAGUCUUCUGAUGAGC--| CU  U      A         U      G    CUGC 
                    UG  CG UUUGGG CUUUUCCUU CUGAUU UUUG    U
                    AC  GU AAACCU GAAAAGGGA GGCUAA GAGC    U
UCAAGACUUCUUUCAACCAA^ AG  C      A         -      G    ACAA 
     110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Fe Fe In Ma Ma
Star sequence

Mal-Novel-4_5p*

mirBase accessionNone
Sequence
0- GACUUUUCCUUUCUGAUUGUUUG -23
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Mature sequence

Mal-Novel-4_3p

mirBase accessionNone
Sequence
35- AGGAAUCGGAGGGAAAAGAUCC -57
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