| MirGeneDB ID | Mal-Novel-4 |
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| Family name |
MAL-NOVEL-4 (all species) |
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| Seed |
GGAAUCG |
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| Species |
Asian swamp eel (Monopterus albus) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
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| Node of Origin (locus) |
M. albus
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| Node of Origin (family) |
M. albus
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Genome context
(GCA_001952655.1_M_albus_1.0_genomic) |
KV884822.1: 2338967-2339023 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UGGAGUCUUCUGAUGAGCUGCUCGUUUUGGGACUUUUCCUUUCUGAUUGUUUGCUGCUUAACACGAGGAAUCGGAGGGAAAAGAUCCAAACUGGACAAACCAACUUUCUUCAGAACU
Get precursor sequence
|
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| Structure | 10 20 30 40 50
UGGAGUCUUCUGAUGAGC--| CU U A U G CUGC
UG CG UUUGGG CUUUUCCUU CUGAUU UUUG U
AC GU AAACCU GAAAAGGGA GGCUAA GAGC U
UCAAGACUUCUUUCAACCAA^ AG C A - G ACAA
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
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| Star sequence |
Mal-Novel-4_5p* |
| mirBase accession | None |
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| Sequence |
0- GACUUUUCCUUUCUGAUUGUUUG -23
Get sequence
|
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| Mature sequence |
Mal-Novel-4_3p |
| mirBase accession | None |
|---|
| Sequence |
35- AGGAAUCGGAGGGAAAAGAUCC -57
Get sequence
|
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